Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925144.1_cds_XP_016473426.1_65557
CDS Infomation

[gene=LOC107795325] [db_xref=GeneID:107795325] [protein=3-epi-6-deoxocathasterone 23-monooxygenase-like] [protein_id=XP_016473426.1] [location=complement(join(141150..141267,141487..141614,142093..142199,142340..142418,142682..142771,144427..144696,144830..144979,145876..146203,147946..148172))] [gbkey=CDS]
Sequence

ATGAAAGGGGAGTCAGGGGGGAGTTTGGTTTGGATTGGGATAACAACAGTGGTAGCAGTT
GGGTTGTTTATTTATAAGATGAGAAAAGGGCAAAAGGAAAAGAAAGATACAATTAGAGGA
GTTCCAAGAGGGAATTCTGGTTGGCCTCTTTTAGGAGAAACTCTGGAATTCATAGCTTCT
GGTTACACTTCTCGTCCTGTCAGTTTCATGGAGAAACGCAAGTCTCTGTATGGGAAGGTG
TTCAAAACACACATACTAGGGAAAGGAATAATAGTATCAACGGATGCAGAGGTGAACAAA
GTGGTTCTACAGAACAACGGGGATGTATTTGTACCATGTTATCCTAAATCAATAACAGAA
TTGTTTGGGAAGAATTCAATATTGCAAATGAATGGGCCAGTACATAGGAGAGTGCATGGA
CTGATTGGGAGCTTCTTGAAATCAGCACAACTCAAGGCTCGTATTACACGAGATATCGAA
GCCTCCGTTCGCCATTTCTTGTCGACATGGCTGGAAAAACAACACTGTGTCTACGTCCAA
GATGAAGCCAAAAAGATTGCATTTGAGGTACTGGTCAAGCTGATACTAAGCGTAGGCCCT
GGGGAAGAATTGAACTTACTCAAGAAAGAATTTGAAGAATTCACCAAAGGCTTGATTTGT
TTGCCCATTAAACTTCCCGGAACCACACTCTACAAATCTTTAAAGGCCAAAGAAAGGTTA
TCAAGAATGGTAGGGAAGATGGTAGAGGACAGAAAATTAAGAATGGAAACAAGGGAAGAG
AAGGCGTTACCAAATGATGCAATTGATGTGCTTTTAGGATATGCTGATGGGGCAAAGCAA
CCTCTGCCACCGTCTGATTTCATCAGTGGGAATTTGATAGAGATGATGATCCCCGGTGAA
GAGACGGTACCAACGGCCATGACCTTAGCTGTCAAATTCCTAAGTGACAACCCCGTCGCT
CTAGCTCGCTTAGTGGAGGAGAATATGGAATTGAAGCGGCAGAAGATTAGTTCCTCTGAA
GATTATAGTTGGACAGATTATATGTCATTGCCCTTCACTCAGAATGTTATCAGTGAAACG
TTGAGATTGGCAAATATCATTAATGCAGTTTGGAGAAAAGCTCTCAAGGATGTCAAAATC
AAAGGGCATTTGATACCAAAAGGGTGGTGTGCTTTGGCATCCTTCACTTCAGTTCACATG
GATGAAGAGAATTATGAAAATCCATACAATTTTGATCCCTGCAGATGGGAGAAGGTTGGA
ATTGCTGTGACTAGCAGCACATTTACACCATTTGGTGGAGGACAGAGGCTTTGTCCTGGT
TTAGAACTTTCAAGGCTTGAAATCTCCATTTTCCTCCACCATCTCGTCACCACCTACAGA
TGGGTGGCAGAGAAGGATGAGATTGTCTATTTCCCAACAGTGAAGATGAAGAGCAAGCTG
CCTATCAACATCATGCCCTTTGAGCAAAAACCACTAATTCAAACCAAACAAAATTAA

Peptide Sequence

PEP ID

XP_016473426.1
PEP Infomation

PREDICTED: 3-epi-6-deoxocathasterone 23-monooxygenase-like [Nicotiana tabacum]
Sequence

MKGESGGSLVWIGITTVVAVGLFIYKMRKGQKEKKDTIRGVPRGNSGWPLLGETLEFIAS
GYTSRPVSFMEKRKSLYGKVFKTHILGKGIIVSTDAEVNKVVLQNNGDVFVPCYPKSITE
LFGKNSILQMNGPVHRRVHGLIGSFLKSAQLKARITRDIEASVRHFLSTWLEKQHCVYVQ
DEAKKIAFEVLVKLILSVGPGEELNLLKKEFEEFTKGLICLPIKLPGTTLYKSLKAKERL
SRMVGKMVEDRKLRMETREEKALPNDAIDVLLGYADGAKQPLPPSDFISGNLIEMMIPGE
ETVPTAMTLAVKFLSDNPVALARLVEENMELKRQKISSSEDYSWTDYMSLPFTQNVISET
LRLANIINAVWRKALKDVKIKGHLIPKGWCALASFTSVHMDEENYENPYNFDPCRWEKVG
IAVTSSTFTPFGGGQRLCPGLELSRLEISIFLHHLVTTYRWVAEKDEIVYFPTVKMKSKL
PINIMPFEQKPLIQTKQN

Transcript Sequence

Gene sequence data has not been registered.